Signal Peptide Database

Signal Peptide Database - Bacteria

Entry Details

9071

Source Database

UniProtKB/Swiss-Prot

UniProtKB/Swiss-Prot Accession Number

P00692 (Created: 1986-07-21 Updated: 2009-01-20)

UniProtKB/Swiss-Prot Entry Name

AMY_BACAM

Protein Name

Alpha-amylase

Gene

Organism Scientific

Bacillus amyloliquefaciens

Organism Common

Lineage

Bacteria
  Firmicutes
    Bacillales
      Bacillaceae
        Bacillus

Protein Length [aa]

514

Protein Mass [Da]

58403

Features

TypeDescriptionStatusStartEnd
signal peptide         1   31
chain   Alpha-amylase      32   514
strand         36   38
strand         46   48
strand         68   71
strand         75   79
strand         84   89
strand         101   103
strand         125   130
strand         133   135
strand         139   150
strand         153   157
strand         162   170
strand         189   195
strand         200   206
strand         215   217
strand         228   232
strand         258   261
strand         288   291
strand         312   315
strand         351   353
strand         385   393
strand         403   405
strand         430   433
strand         436   444
strand         455   463
strand         465   470
strand         479   482
strand         497   503
helix         50   64
helix         109   120
helix         186   188
helix         237   254
helix         264   266
helix         269   283
helix         298   307
helix         317   328
helix         335   337
helix         343   346
helix         348   350
helix         375   384
helix         394   398
helix         412   424
helix         473   475
active site   Nucleophile      262   262
active site   Proton donor      292   292
active site      by similarity   359   359
metal ion-binding site   Calcium 1      133   133
metal ion-binding site   Sodium      190   190
metal ion-binding site   Calcium 2      190   190
metal ion-binding site   Calcium 2; via carbonyl oxygen      212   212
metal ion-binding site   Calcium 2      214   214
metal ion-binding site   Sodium      214   214
metal ion-binding site   Calcium 1      225   225
metal ion-binding site   Sodium      225   225
metal ion-binding site   Sodium      231   231
metal ion-binding site   Calcium 1      231   231
metal ion-binding site   Calcium 2      233   233
metal ion-binding site   Calcium 2      235   235
metal ion-binding site   Calcium 1; via carbonyl oxygen      266   266
metal ion-binding site   Calcium 3; via carbonyl oxygen      331   331
metal ion-binding site   Calcium 3   by similarity   438   438
metal ion-binding site   Calcium 3   by similarity   461   461
turn         121   123
turn         173   177
turn         196   199
turn         308   310
turn         338   341
turn         358   360
turn         372   374

SP Length

----+----1----+----2----+----3----+----4----+----5

Signal Peptide

MIQKRKRTVSFRLVLMCTLLFVSLPITKTSA

Sequence

MIQKRKRTVSFRLVLMCTLLFVSLPITKTSAVNGTLMQYFEWYTPNDGQH
WKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKG
TVRTKYGTKSELQDAIGSLHSRNVQVYGDVVLNHKAGADATEDVTAVEVN
PANRNQETSEEYQIKAWTDFRFPGRGNTYSDFKWHWYHFDGADWDESRKI
SRIFKFRGEGKAWDWEVSSENGNYDYLMYADVDYDHPDVVAETKKWGIWY
ANELSLDGFRIDAAKHIKFSFLRDWVQAVRQATGKEMFTVAEYWQNNAGK
LENYLNKTSFNQSVFDVPLHFNLQAASSQGGGYDMRRLLDGTVVSRHPEK
AVTFVENHDTQPGQSLESTVQTWFKPLAYAFILTRESGYPQVFYGDMYGT
KGTSPKEIPSLKDNIEPILKARKEYAYGPQHDYIDHPDVIGWTREGDSSA
AKSGLAALITDGPGGSKRMYAGLKNAGETWYDITGNRSDTVKIGSDGWGE
FHVNDGSVSIYVQK

Original

----+----1----+----2----+----3----+----4----+----5

Hydropathies

Signal Peptide Website