Signal Peptide Database

Signal Peptide Database - Mammalia

Entry Details

158

Source Database

UniProtKB/Swiss-Prot

UniProtKB/Swiss-Prot Accession Number

Q9QZR9 (Created: 2007-04-17 Updated: 2008-11-25)

UniProtKB/Swiss-Prot Entry Name

CO4A4_MOUSE

Protein Name

Collagen alpha-4(IV) chain

Gene

Col4a4

Organism Scientific

Mus musculus

Organism Common

Mouse

Lineage

Eukaryota
  Metazoa
    Chordata
      Craniata
        Vertebrata
          Euteleostomi
            Mammalia
              Eutheria
                Euarchontoglires
                  Glires
                    Rodentia
                      Sciurognathi
                        Muroidea
                          Muridae
                            Murinae
                              Mus

Protein Length [aa]

1682

Protein Mass [Da]

164096

Features

TypeDescriptionStatusStartEnd
signal peptide      potential   1   32
chain   Collagen alpha-4(IV) chain      33   1682
disulfide bond   Or C-1472 with C-1558   by similarity   1472   1561
disulfide bond   Or C-1505 with C-1561   by similarity   1505   1558
disulfide bond      by similarity   1517   1523
disulfide bond   Or C-1580 with C-1675   by similarity   1580   1678
disulfide bond   Or C-1614 with C-1678   by similarity   1614   1675
disulfide bond      by similarity   1626   1633
domain   Collagen IV NC1      1457   1682
region of interest   7S domain   by similarity   31   56
region of interest   Triple-helical region   by similarity   57   1451
glycosylation site   N-linked (GlcNAc...)   potential   43   43
glycosylation site   N-linked (GlcNAc...)   potential   134   134
glycosylation site   N-linked (GlcNAc...)   potential   661   661
site   Cleavage; by collagenase   by similarity   1197   1198
splice variant   (in isoform 2)      0   0
splice variant   (in isoform 2)      489   1682
short sequence motif   Cell attachment site   potential   86   88
short sequence motif   Cell attachment site   potential   137   139
short sequence motif   Cell attachment site   potential   181   183
short sequence motif   Cell attachment site   potential   587   589
short sequence motif   Cell attachment site   potential   593   595
short sequence motif   Cell attachment site   potential   716   718
short sequence motif   Cell attachment site   potential   980   982
short sequence motif   Cell attachment site   potential   992   994
short sequence motif   Cell attachment site   potential   1144   1146

SP Length

----+----1----+----2----+----3----+----4----+----5

Signal Peptide

MRCFFRWTKSFVTAPWSLIFILFTIQYEYGSG

Sequence

MRCFFRWTKSFVTAPWSLIFILFTIQYEYGSGKKYGGPCGGRNCSVCQCF
PEKGSRGHPGPLGPQGPIGPLGPLGPIGIPGEKGERGDSGSPGPPGEKGD
KGPTGVPGFPGVDGVPGHPGPPGPRGKPGVDGYNGSRGDPGYPGERGAPG
PGGPPGQPGENGEKGRSVYITGGVKGIQGDRGDPGPPGLPGSRGAQGSPG
PMGHAGAPGLAGPIGHPGSPGLKGNPATGLKGQRGEPGEVGQRGPPGPTL
LVQPPDLSIYKGEKGVKGMPGMIGPPGPPGRKGAPGVGIKGEKGIPGFPG
PRGEPGSHGPPGFPGFKGIQGAAGEPGLFGFLGPKGDLGDRGYPGPPGIL
LTPAPPLKGVPGDPGPPGYYGEIGDVGLPGPPGPPGRPGETCPGMMGPPG
PPGVPGPPGFPGEAGVPGRLDCAPGKPGKPGLPGLPGAPGPEGPPGSDVI
YCRPGCPGPMGEKGKVGPPGRRGAKGAKGNKGLCTCPPGPMGPPGPPGPP
GRQGSKGDLGLPGWHGEKGDPGQPGAEGPPGPPGRPGAMGPPGHKGEKGD
MVISRVKGQKGERGLDGPPGFPGPHGQDGGDGRPGERGDPGPRGDHKDAA
PGERGLPGLPGPPGRTGPEGPPGLGFPGPPGQRGLPGEPGRPGTRGFDGT
KGQKGDSILCNVSYPGKPGLPGLDGPPGLKGFPGPPGAPGMRCPDGQKGQ
RGKPGMSGIPGPPGFRGDMGDPGIKGEKGTSPIGPPGPPGSPGKDGQKGI
PGDPAFGDPGPPGERGLPGAPGMKGQKGHPGCPGAGGPPGIPGSPGLKGP
KGREGSRGFPGIPGSPGHSCERGAPGIPGQPGLPGTPGDPGAPGWKGQPG
DMGPSGPAGMKGLPGLPGLPGADGLRGPPGIPGPNGEDGLPGLPGLKGLP
GLPGFPGFPGERGKPGPDGEPGRKGEVGEKGWPGLKGDLGERGAKGDRGL
PGDAGEAVTSRKGEPGDAGPPGDGGFSGERGDKGSSGMRGGRGDPGRDGL
PGLHRGQPGIDGPPGPPGPPGPPGSPGLRGVIGFPGFPGDQGDPGSPGPP
GFPGDDGARGPKGYKGDPASQCGPPGPKGEPGSPGYQGRTGVPGEKGFPG
DEGPRGPPGRPGQPGSFGPPGCPGDPGMPGLKGHPGEVGDPGPRGDAGDF
GRPGPAGVKGPLGSPGLNGLHGLKGEKGTKGASGLLEMGPPGPMGMPGQK
GEKGDPGSPGISPPGLPGEKGFPGPPGRPGPPGPAGAPGRAAKGDIPDPG
PPGDRGPPGPDGPRGVPGPPGSPGNVDLLKGDPGDCGLPGPPGSRGPPGP
PGCQGPPGCDGKDGQKGPMGLPGLPGPPGLPGAPGEKGLPGPPGRKGPVG
PPGCRGEPGPPADVDSCPRIPGLPGVPGPRGPEGAMGEPGRRGLPGPGCK
GEPGPDGRRGQDGIPGSPGPPGRKGDTGEAGCPGAPGPPGPTGDPGPKGF
GPGSLSGFLLVLHSQTDQEPACPVGMPRLWTGYSLLYMEGQEKAHNQDLG
LAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYWLSSAAPLPMMPLSEEE
IRSYISRCAVCEAPAQAVAVHSQDQSIPPCPRTWRSLWIGYSFLMHTGAG
DQGGGQALMSPGSCLEDFRAAPFVECQGRQGTCHFFANEYSFWLTTVNPD
LQFASGPSPDTLKEVQAQRRKISRCQVCMKHS

Original

----+----1----+----2----+----3----+----4----+----5

Hydropathies

Signal Peptide Website